Sean Jordan

July 9, 2024

Medulloblastoma Spatial Transcriptomics Reveals Tumor Microenvironment Heterogeneity with High-Density Progenitor Cell Regions Correlating with High-Risk Disease

The tumor microenvironment (TME) of medulloblastoma (MB) influences progression and therapy response, presenting a promising target for therapeutic advances. Prior single-cell analyses have characterized the cellular components of the TME but lack spatial context. To address this, we performed spatial transcriptomic sequencing on sixteen pediatric MB samples obtained at diagnosis, including two matched diagnosis-relapse pairs. Our analyses revealed inter- and intra-tumoral heterogeneity within...
July 1, 2024

Medulloblastoma Paper is in Preprint on bioRxiv!

Our article titled “Medulloblastoma Spatial Transcriptomics Reveals Tumor Microenvironment Heterogeneity with High-Density Progenitor Cell Regions Correlating with High-Risk Disease” is now online at bioRxiv! Here is the link: https://www.biorxiv.org/content/10.1101/2024.06.25.600684v1.   Huge thanks to Franlin Chien, Marina Michaud, and Mojtaba Bakhtiari for leading this analysis!
June 26, 2024

Vein Graft Paper Published in Circulation Research!

We are excited to announce that our paper titled “Early Injury Landscape in Vein Harvest by Single-Cell and Spatial Transcriptomics” has been published in Circulation Research! Go check it out at https://www.ahajournals.org/doi/10.1161/CIRCRESAHA.123.323939!   Huge thanks to Marina Michaud, Mojtaba Bakhtiari, Beena Thomas, and William Pilcher for leading this effort!
May 29, 2024

Early Injury Landscape in Vein Harvest by Single-Cell and Spatial Transcriptomics

CONCLUSIONS: Vein conduit harvest and distension elicit a prompt genomic response facilitated by distinct cellular subpopulations heterogeneously distributed throughout the vein wall. This response was found to be further exacerbated following vein graft implantation, resulting in a cascade of maladaptive gene regulatory networks. Together, these results suggest that distension initiates the upregulation of pathological pathways that may ultimately contribute to bypass graft failure and presents...